BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034D05LP1|AL429889
(165 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1209 110 7e-25
>3x_Contig1209
Length = 5033
Score = 110 bits (55), Expect = 7e-25
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 14 aacataatattaaatattatatattaattcatacatctcactactaamatcacttcatca 73
|||| ||||||||| |||||| ||||| |||||||| ||| ||||| | ||||||| ||
Sbjct: 2512 aacagaatattaaagattatagattaaggcatacatcgcacgactaacagcacttcagca 2571
Query: 74 atcttaaatattcaaaatattacacactaaatttacaccatattatctacatt 126
| |||||||| ||||||||| |||||| ||||| |||||||||||||||||||
Sbjct: 2572 agcttaaatagtcaaaatatgacacacgaaattgacaccatattatctacatt 2624
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1858
Number of Sequences: 1807
Number of extensions: 1858
Number of successful extensions: 210
Number of sequences better than 1.0e-20: 1
length of query: 165
length of database: 10,358,551
effective HSP length: 15
effective length of query: 150
effective length of database: 10,331,446
effective search space: 1549716900
effective search space used: 1549716900
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 49 (98.8 bits)